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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
total RNA-seq
16
ATAC-seq
16
WGBS
12
single cell RNA-seq
6
ChIP-seq
1
Hi-C
Assay category
33
Transcription
16
DNA accessibility
16
DNA methylation
6
DNA binding
1
3D chromatin structure
Target of assay
6
control
Date released
29
May, 2022
10
February, 2023
10
September, 2018
9
July, 2018
6
August, 2017
3
April, 2018
2
August, 2020
2
September, 2020
1
October, 2022
Available data
56
fastq
42
bam
39
bigWig
29
zippedFastqFolder
22
tsv
bed narrowPeak
7
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
72
Homo sapiens
Biosample type
72
primary cell
Organ
72
epithelium
72
pancreas
Project
44
HPAP
28
AMP
Genome assembly (visualization)
25
GRCh38
23
hg19
Lab
44
Klaus Kaestner, Upenn
28
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
ATAC-seq
WGBS
single cell RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic beta cell
21
16
16
12
6
1
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