Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16WGBS
  • 13ATAC-seq
  • 11total RNA-seq
  • 6ChIP-seq
  • 1Hi-C
Assay category
  • 16DNA methylation
  • 13DNA accessibility
  • 11Transcription
  • 6DNA binding
  • 13D chromatin structure
Target of assay
  • 6control
Date released
  • 29May, 2022
  • 10February, 2023
  • 6August, 2017
  • 1October, 2022
  • 1September, 2020
Available data
  • 56fastq
  • 42bam
  • bigWig
  • 29zippedFastqFolder
  • 22tsv
  • 14bed narrowPeak
  • 7bigBed narrowPeak
  • 1bedpe bed3+
  • 1cool
  • 1hic
Organism
  • 47Homo sapiens
Biosample type
  • 47primary cell
Organ
  • 47epithelium
  • 47pancreas
Project
  • 41HPAP
  • 6AMP
Genome assembly (visualization)
  • 1hg19
Lab
  • 41Klaus Kaestner, Upenn
  • 6AMP-T2D consortium
Audit category:
  • 1audit script error
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

47 results

search-icontable-tab-icon
Clear Filters
WGBS
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic beta cell16131161
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego