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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12single cell RNA-seq
  • 10ATAC-seq
  • 10total RNA-seq
  • 7ChIP-seq
Assay category
  • 22Transcription
  • 10DNA accessibility
  • 7DNA binding
Target of assay
  • 7histone
  • 7histone modification
  • 4narrow histone mark
  • 3broad histone mark
Date released
  • 14September, 2018
  • 9July, 2018
  • 8August, 2017
  • 3April, 2018
  • 2August, 2020
  • 2September, 2017
  • 1September, 2020
Available data
  • 56fastq
  • 42bam
  • 39bigWig
  • 29zippedFastqFolder
  • 22tsv
  • 14bed narrowPeak
  • 7bigBed narrowPeak
  • 1bedpe bed3+
  • 1cool
  • 1hic
Organism
  • 39Homo sapiens
Biosample type
  • 39primary cell
Organ
  • 39epithelium
  • 39pancreas
Project
  • 36AMP
  • 3HPAP
Genome assembly (visualization)
  • 39GRCh38
  • 36hg19
Lab
  • 36AMP-T2D consortium
  • 3Klaus Kaestner, Upenn
Audit category:
  • 2inconsistent control read length
BIOSAMPLE
ASSAY

39 results

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single cell RNA-seq
ATAC-seq
total RNA-seq
ChIP-seq
primary cell
pancreatic beta cell1210107
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