Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
WGBS
13
ChIP-seq
11
total RNA-seq
10
single cell RNA-seq
1
Hi-C
Assay category
21
Transcription
16
DNA methylation
13
DNA binding
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
narrow histone mark
3
broad histone mark
Date released
16
May, 2022
13
August, 2017
10
February, 2023
8
July, 2018
2
April, 2018
1
October, 2022
1
September, 2020
Available data
34
fastq
23
bam
17
bigWig
10
tsv
7
bed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
51
Homo sapiens
Biosample type
51
primary cell
Organ
51
pancreas
35
epithelium
Project
28
HPAP
23
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
28
Klaus Kaestner, Upenn
23
AMP-T2D consortium
Audit category:
1
audit script error
Audit category:
2
inconsistent control read length
files.run_type!
paired-ended
BIOSAMPLE
ASSAY
51 results
search-icon
table-tab-icon
Clear Filters
WGBS
ChIP-seq
total RNA-seq
single cell RNA-seq
Hi-C
primary cell
pancreatic beta cell
16
13
11
10
1
Download