Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 23ATAC-seq
  • 16WGBS
  • 10total RNA-seq
  • 2single cell RNA-seq
Assay category
  • 23DNA accessibility
  • 16DNA methylation
  • 12Transcription
Date released
  • 29May, 2022
  • 14September, 2018
  • 2August, 2020
  • 2September, 2017
  • 1April, 2018
  • 1August, 2017
  • 1July, 2018
  • 1September, 2020
Available data
  • 29zippedFastqFolder
  • 22bigWig
  • 22fastq
  • 19bam
  • 12tsv
  • 7bed narrowPeak
  • 7bigBed narrowPeak
Organism
  • 51Homo sapiens
Biosample type
  • 51primary cell
Organ
  • 51epithelium
  • 51pancreas
Project
  • 32HPAP
  • 19AMP
Genome assembly (visualization)
  • 22GRCh38
  • 19hg19
Lab
  • 32Klaus Kaestner, Upenn
  • 19AMP-T2D consortium
BIOSAMPLE
ASSAY

51 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
WGBS
total RNA-seq
single cell RNA-seq
primary cell
pancreatic beta cell2316102
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego