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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 23ATAC-seq
  • 21total RNA-seq
  • 16WGBS
  • 13ChIP-seq
  • 1single cell RNA-seq
Assay category
  • 23DNA accessibility
  • 22Transcription
  • 16DNA methylation
  • 13DNA binding
Target of assay
  • 7histone
  • 7histone modification
  • 6control
  • 4narrow histone mark
  • 3broad histone mark
Date released
  • 29May, 2022
  • 14August, 2017
  • 14September, 2018
  • 10February, 2023
  • 2August, 2020
  • 2September, 2017
  • 2September, 2020
  • 1April, 2018
Available data
  • 45fastq
  • 31bam
  • 29zippedFastqFolder
  • 28bigWig
  • 14bed narrowPeak
  • 11tsv
  • 7bigBed narrowPeak
Organism
  • 74Homo sapiens
Biosample type
  • 74primary cell
Organ
  • 74epithelium
  • 74pancreas
Project
  • 43HPAP
  • 31AMP
Genome assembly (visualization)
  • 28GRCh38
  • 25hg19
Lab
  • 43Klaus Kaestner, Upenn
  • 31AMP-T2D consortium
Audit category:
  • 2inconsistent control read length
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

74 results

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ATAC-seq
total RNA-seq
WGBS
ChIP-seq
single cell RNA-seq
primary cell
pancreatic beta cell232116131
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