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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
21
total RNA-seq
16
WGBS
12
single cell RNA-seq
6
ChIP-seq
1
Hi-C
Assay category
33
Transcription
23
DNA accessibility
16
DNA methylation
6
DNA binding
1
3D chromatin structure
Target of assay
7
histone
histone modification
6
control
4
narrow histone mark
3
broad histone mark
Date released
29
May, 2022
14
September, 2018
10
February, 2023
9
July, 2018
7
August, 2017
3
April, 2018
2
August, 2020
2
September, 2017
2
September, 2020
1
October, 2022
Available data
49
fastq
35
bam
32
bigWig
29
zippedFastqFolder
22
tsv
7
bed narrowPeak
7
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
79
Homo sapiens
Biosample type
79
primary cell
Organ
79
epithelium
79
pancreas
Project
44
HPAP
35
AMP
Genome assembly (visualization)
32
GRCh38
30
hg19
Lab
44
Klaus Kaestner, Upenn
35
AMP-T2D consortium
Audit category:
1
audit script error
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
79 results
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ATAC-seq
total RNA-seq
WGBS
single cell RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic beta cell
23
21
16
12
6
1
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