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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 18ChIP-seq
  • 4total RNA-seq
  • 1GRO-seq
Assay category
  • 18DNA binding
  • 4Transcription
Target of assay
  • 10histone
  • 10histone modification
  • 6narrow histone mark
  • 5control
  • 4broad histone mark
  • 3transcription factor
Date released
  • 13February, 2018
  • 9December, 2017
  • 1January, 2018
Available data
  • 23fastq
  • 22bam
  • 17bigWig
  • 12bed narrowPeak
  • 4tsv
  • 3bed bed3+
Organism
  • 23Homo sapiens
Biosample type
  • 23in vitro differentiated cells
Organ
  • 23embryo
Project
  • 23AMP
Genome assembly (visualization)
  • 17GRCh38
  • 17hg19
  • 1hg18
Lab
  • 23AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 2inconsistent control read length
files.platform.term_name!
  • Applied Biosystems SOLiD System 3 Plus
BIOSAMPLE
ASSAY

23 results

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ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm1841
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