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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9ChIP-seq
  • 2DNase-seq
  • 1RRBS
  • 1total RNA-seq
Assay category
  • 9DNA binding
  • 2DNA accessibility
  • 1DNA methylation
  • 1Transcription
Target of assay
  • 12histone
  • 12histone modification
  • broad histone mark
  • 6narrow histone mark
  • 2RNA binding protein
  • 2transcription factor
  • 1chromatin remodeller
  • 1control
Date released
  • 12August, 2017
  • 1July, 2019
Available data
  • 12bam
  • 12bigWig
  • 11fastq
  • 10bed narrowPeak
  • 10bigBed narrowPeak
  • 8bed broadPeak
  • 8bigBed broadPeak
  • 6tagAlign
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1tsv
Organism
  • 13Homo sapiens
Biosample type
  • 13primary cell
Project
  • 13AMP
Genome assembly (visualization)
  • 13hg19
  • 8GRCh38
Lab
  • 13AMP-T2D consortium
Audit category:
  • 1inconsistent assembly
  • 1inconsistent control read length
  • 1inconsistent control run_type
target.investigated_as!
  • broad histone mark
BIOSAMPLE
ASSAY

13 results

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ChIP-seq
DNase-seq
RRBS
total RNA-seq
primary cell
skeletal muscle myoblast9211
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