Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1171
candidate regulatory elements
874
target gene predictions
692
accessible chromatin
385
histone modifications
166
binding sites
110
variant allelic effects
35
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1149
September, 2022
1003
February, 2021
328
November, 2021
229
May, 2021
124
February, 2024
124
June, 2020
120
May, 2020
56
January, 2021
52
January, 2020
41
March, 2020
41
November, 2022
35
August, 2021
31
February, 2023
29
August, 2017
29
October, 2022
19
April, 2020
15
May, 2022
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3466
bed bed3+
630
tsv
605
bed bed9
505
bigWig
38
bigBed bed9
27
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3420
Homo sapiens
Biosample type
cell line
1580
tissue
1534
primary cell
346
in vitro differentiated cells
4
stem cell
Organ
516
epithelium
302
connective tissue
kidney
267
musculature of body
243
brain
198
intestine
169
limb
166
lung
165
heart
153
vasculature
139
pancreas
118
blood vessel
110
extraembryonic component
109
skin of body
107
large intestine
93
stomach
89
eye
76
liver
69
embryo
64
small intestine
57
adrenal gland
placenta
51
ureter
46
adipose tissue
44
mammary gland
43
artery
43
penis
38
thymus
33
esophagus
31
gonad
27
bone element
26
spinal cord
26
spleen
19
prostate gland
17
ovary
17
thyroid gland
15
skeleton
15
vein
14
bronchus
14
nerve
14
uterus
13
lymphoid tissue
13
testis
12
lymphatic vessel
11
bone marrow
10
bodily fluid
10
mouth
9
blood
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Project
3058
AMP
328
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3459
hg19
596
GRCh38
biosample_type!
cell line
organ_slims!
kidney
placenta
BIOSAMPLE
TYPE
3466 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
1
2
stomach
40
21
3
1
brain
29
16
2
3
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 200 more…
primary cell
monocyte
2
18
86
1
1
1
CD8-positive, alpha-beta T cell
7
5
4
30
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
1
2
2
2
1
+ See 308 more…
in vitro differentiated cells
neural progenitor cell
5
5
10
14
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
4
1
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download