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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
338
ChIP-seq
Assay category
338
DNA binding
Target of assay
284
histone
284
histone modification
157
narrow histone mark
127
broad histone mark
54
control
Date released
84
May, 2021
71
August, 2017
66
November, 2017
50
May, 2020
49
October, 2019
14
October, 2017
4
August, 2021
Available data
2447
bam
2316
bigWig
1324
tsv
1235
bed narrowPeak
717
fastq
656
bigBed narrowPeak
338
tagAlign
262
bed broadPeak
245
bed bed3+
225
bigBed broadPeak
157
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
bigBed bedMethyl
17
hic
14
bedpe bed3+
7
csv
6
bed bed3
4
hdf5
3
cool
1
bedpe
1
tagAlign bed3+
1
tar
Organism
331
Homo sapiens
Biosample type
238
tissue
100
primary cell
in vitro differentiated cells
cell line
Organ
118
brain
74
liver
16
pancreas
15
musculature of body
8
adipose tissue
8
connective tissue
4
epithelium
1
pituitary gland
Project
254
AMP
84
T1D
Genome assembly (visualization)
214
GRCh38
204
hg19
Lab
254
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
2
inconsistent assembly
biosample_type!
cell line
in vitro differentiated cells
files.file_type!
bigBed bedMethyl
month_released!
September, 2018
BIOSAMPLE
ASSAY
338 results
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Clear Filters
ChIP-seq
tissue
liver
70
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
skeletal muscle tissue
15
+ See 43 more…
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
See all biosamples
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