Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
candidate regulatory elements
83
target gene predictions
79
chromatin state
76
accessible chromatin
12
gene expression
9
binding sites
9
histone modifications
9
variant allelic effects
8
eQTL
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
219
September, 2022
99
February, 2021
24
February, 2023
16
February, 2024
16
November, 2022
15
November, 2021
9
March, 2020
8
February, 2020
8
June, 2020
7
January, 2020
7
May, 2020
4
May, 2021
4
October, 2022
3
August, 2017
3
May, 2022
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Available data
348
bed bed3+
76
bed bed9
50
bigWig
16
tsv
3
bigBed bed9
Organism
449
Homo sapiens
Biosample type
376
tissue
73
primary cell
cell line
in vitro differentiated cells
Organ
890
epithelium
610
kidney
387
connective tissue
385
brain
356
musculature of body
256
vasculature
255
intestine
247
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
123
liver
119
stomach
93
eye
85
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
58
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
21
vein
20
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
434
AMP
15
ENCODE
Genome assembly (visualization)
439
hg19
108
GRCh38
biosample_type!
cell line
in vitro differentiated cells
BIOSAMPLE
TYPE
449 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
retina
6
3
3
23
1
1
1
1
1
pigmented layer of retina
20
+ See 22 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
retinal pigment epithelial cell
2
1
1
3
2
1
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 10 more…
See all biosamples
Download