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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
Assay category
8
DNA binding
Target of assay
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
4
control
3
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
7
December, 2017
1
May, 2021
Available data
8
bam
8
bed narrowPeak
8
bigWig
7
fastq
5
bigBed narrowPeak
1
tagAlign
Organism
8
Homo sapiens
Biosample type
primary cell
8
in vitro differentiated cells
cell line
Organ
114
brain
38
heart
36
liver
18
blood vessel
18
vasculature
15
limb
15
pancreas
10
kidney
8
embryo
8
epithelium
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
musculature of body
2
spleen
1
connective tissue
1
lymph node
1
pituitary gland
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
biosample_type!
cell line
primary cell
month_released!
August, 2017
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
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