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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
11
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
18
October, 2019
1
February, 2020
Available data
18
bam
7
bigWig
5
tsv
3
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
575
connective tissue
457
adipose tissue
434
pancreas
295
liver
279
kidney
219
heart
158
bone element
81
brain
79
blood vessel
79
vasculature
73
limb
57
musculature of body
54
eye
53
artery
24
epithelium
20
lung
19
nerve
19
spleen
18
ureter
17
embryo
16
skeleton
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
19
AMP-T2D consortium
biosample_type!
cell line
primary cell
organ_slims!
skin of body
target.investigated_as!
histone
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
11
5
2
1
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