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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
1
DNase-seq
1
small RNA-seq
1
total RNA-seq
Assay category
10
DNA binding
2
Transcription
1
DNA accessibility
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
2
control
Date released
11
June, 2019
2
July, 2019
Available data
13
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
tissue
13
primary cell
Organ
418
epithelium
349
pancreas
136
connective tissue
33
kidney
30
vasculature
29
embryo
28
blood vessel
28
liver
22
vein
13
heart
13
musculature of body
11
brain
8
blood
8
bodily fluid
4
eye
3
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
13
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
13
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
biosample_type!
cell line
tissue
files.file_type!
bed bedMethyl
month_released!
November, 2017
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
DNase-seq
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
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