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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
2
Hi-C
2
total RNA-seq
Assay category
3
DNA binding
2
3D chromatin structure
2
DNA accessibility
2
Transcription
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
4
July, 2019
3
November, 2017
2
June, 2019
Available data
9
bigWig
7
bam
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
hdf5
2
tsv
Organism
9
Homo sapiens
Biosample type
tissue
cell line
9
primary cell
Organ
430
epithelium
349
pancreas
137
connective tissue
37
vasculature
36
kidney
31
blood vessel
29
embryo
29
liver
vein
21
brain
14
heart
14
musculature of body
8
blood
8
bodily fluid
5
eye
3
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
9
AMP
Genome assembly (visualization)
8
hg19
6
GRCh38
Lab
9
AMP-T2D consortium
biosample_type!
cell line
tissue
month_released!
February, 2020
organ_slims!
vein
BIOSAMPLE
ASSAY
9 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
total RNA-seq
primary cell
brain microvascular endothelial cell
3
1
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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