Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
550
gene expression
549
accessible chromatin
428
target gene predictions
387
candidate regulatory elements
301
histone modifications
231
chromatin state
152
differential activity
137
binding sites
88
variant allelic effects
45
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
631
February, 2021
562
September, 2022
331
November, 2021
291
May, 2021
286
September, 2023
184
February, 2024
93
May, 2020
73
August, 2021
72
June, 2020
56
January, 2021
55
March, 2023
40
May, 2022
39
January, 2022
31
October, 2022
27
November, 2022
26
January, 2020
19
April, 2020
17
March, 2020
16
February, 2020
10
August, 2017
9
August, 2018
9
October, 2019
5
February, 2023
3
November, 2019
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1907
bed bed3+
664
tsv
420
bigWig
194
bed bed9
108
txt
27
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2847
Homo sapiens
Biosample type
tissue
2448
primary cell
cell line
440
in vitro differentiated cells
3
stem cell
Organ
845
epithelium
334
connective tissue
310
kidney
171
vasculature
129
pancreas
114
blood vessel
109
skin of body
70
liver
embryo
52
musculature of body
49
mammary gland
47
penis
45
extraembryonic component
40
brain
34
lung
32
heart
29
artery
29
eye
23
intestine
20
vein
19
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
nose
4
small intestine
4
spinal cord
3
thyroid gland
2
adipose tissue
2
ovary
1
limb
1
pericardium
testis
1
thymus
Project
2200
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
2
community
Genome assembly (visualization)
2145
hg19
759
GRCh38
biosample_type!
cell line
tissue
organ_slims!
embryo
testis
vagina
BIOSAMPLE
TYPE
2893 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 444 more…
in vitro differentiated cells
neural progenitor cell
7
10
5
5
15
4
hematopoietic multipotent progenitor cell
1
1
10
19
1
10
1
adipocyte
1
4
6
4
1
6
1
embryonic stem cell
6
1
1
5
1
cardiomyocytes
11
+ See 113 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download