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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
2
MeRIP-seq
Assay category
28
DNA binding
Target of assay
208
histone
208
histone modification
110
broad histone mark
98
narrow histone mark
30
control
17
transcription factor
10
RNA binding protein
2
nucleotide modification
Date released
19
August, 2017
8
May, 2021
2
November, 2020
1
October, 2017
Available data
bam
106
fastq
64
tagAlign
10
bigWig
9
bed bed3+
3
tsv
Organism
30
Homo sapiens
Biosample type
20
tissue
cell line
7
in vitro differentiated cells
3
primary cell
Organ
8
pancreas
7
connective tissue
5
adipose tissue
3
liver
3
musculature of body
1
brain
Project
30
AMP
Genome assembly (visualization)
3
hg19
Lab
20
AMP-T2D consortium
8
Kyle Gaulton, UCSD
2
Rohit N. Kulkarni, M.D., Ph.D.
biosample_type!
cell line
files.file_type!
bam
bed broadPeak
month_released!
September, 2018
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
subcutaneous abdominal adipose tissue
5
liver
3
skeletal muscle tissue
3
brain
1
in vitro differentiated cells
embryonic stem cell
5
adipocyte
2
primary cell
CD8-positive, alpha-beta T cell
3
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