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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Assay category
17
DNA binding
Target of assay
608
histone modification
607
histone
356
narrow histone mark
260
control
250
broad histone mark
76
transcription factor
17
RNA binding protein
2
chromatin remodeller
2
nucleotide modification
Date released
6
August, 2017
5
May, 2021
5
May, 2024
1
April, 2019
Available data
43
bigWig
42
bed narrowPeak
39
bam
bigBed narrowPeak
26
fastq
5
bed broadPeak
5
bigBed broadPeak
2
bed bed3+
Organism
17
Homo sapiens
Biosample type
9
in vitro differentiated cells
8
tissue
cell line
Organ
5
heart
4
connective tissue
2
pancreas
1
kidney
Project
17
AMP
Genome assembly (visualization)
11
GRCh38
6
hg19
Lab
7
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
Audit category:
1
missing controlled_by
biosample_type!
cell line
files.file_type!
bed bedMethyl
bigBed narrowPeak
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
tissue
left cardiac atrium
5
islet of Langerhans
2
kidney
1
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