Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
8
snATAC-seq
5
total RNA-seq
1
ATAC-seq
Assay category
35
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
40
October, 2019
8
January, 2021
1
February, 2020
Available data
42
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
5
tsv
2
bed bed3+
bed broadPeak
2
bigBed broadPeak
Organism
49
Homo sapiens
Biosample type
cell line
41
tissue
8
primary cell
Organ
834
pancreas
674
connective tissue
488
adipose tissue
423
epithelium
385
liver
297
heart
257
kidney
239
brain
159
bone element
153
vasculature
151
blood vessel
86
limb
71
artery
57
eye
50
musculature of body
41
nerve
29
embryo
24
spleen
20
lung
18
vein
16
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
41
AMP
8
T1D
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
41
AMP-T2D consortium
8
Kyle Gaulton, UCSD
biosample_type!
cell line
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
49 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
35
5
1
primary cell
peripheral blood mononuclear cell
8
Download