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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
8
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
Assay category
17
Transcription
8
DNA binding
1
3D chromatin structure
Target of assay
8
control
Date released
610
February, 2021
313
May, 2020
269
August, 2017
246
May, 2021
183
August, 2021
168
July, 2018
162
May, 2022
134
February, 2023
110
October, 2019
101
July, 2019
59
September, 2020
51
March, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
November, 2017
27
September, 2018
25
February, 2020
23
February, 2018
23
May, 2019
22
December, 2017
20
November, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
October, 2017
10
December, 2019
10
November, 2018
8
June, 2019
8
November, 2020
7
August, 2020
7
January, 2018
September, 2017
5
March, 2019
4
August, 2018
4
December, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
1
January, 2019
Available data
39
bam
39
fastq
31
bigWig
bed narrowPeak
15
tsv
1
hic
Organism
24
Homo sapiens
Biosample type
23
in vitro differentiated cells
cell line
2
stem cell
1
primary cell
Organ
7
embryo
Project
23
AMP
2
community
1
ITG
Genome assembly (visualization)
16
GRCh38
15
hg19
Lab
23
AMP-T2D consortium
2
Anna Gloyn, Oxford
1
ITG
biosample_type!
cell line
files.file_type!
bed narrowPeak
month_released!
September, 2017
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
4
3
definitive endodermal cell
2
1
embryonic stem cell
2
1
endocrine cell
2
1
posterior foregut
2
1
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stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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