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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
12
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
12
DNA accessibility
4
Transcription
Date released
92
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
101
Homo sapiens
Biosample type
100
tissue
1
primary cell
Organ
pancreas
216
kidney
194
epithelium
159
heart
113
connective tissue
101
bone element
100
liver
71
vasculature
70
blood vessel
65
adipose tissue
64
brain
55
eye
46
artery
31
limb
28
musculature of body
20
lung
16
skeleton
12
nerve
9
spleen
8
blood
8
bodily fluid
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
100
AMP
1
T1D
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
100
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
biosample_type!
cell line
files.file_type!
bigWig
month_released!
August, 2018
organ_slims!
pancreas
BIOSAMPLE
ASSAY
101 results
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RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element
84
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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primary cell
megakaryocyte
1
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