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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
2
MeRIP-seq
Assay category
55
DNA binding
Target of assay
214
histone
214
histone modification
117
broad histone mark
97
narrow histone mark
57
control
30
transcription factor
19
RNA binding protein
2
nucleotide modification
Date released
19
August, 2017
11
October, 2018
10
April, 2019
7
May, 2019
6
September, 2017
2
June, 2019
2
November, 2020
Available data
52
bam
30
fastq
tagAlign
2
bed bed3+
Organism
57
Homo sapiens
Biosample type
43
tissue
14
primary cell
cell line
Organ
39
pancreas
32
connective tissue
23
adipose tissue
23
epithelium
21
liver
20
vasculature
19
blood vessel
18
heart
17
limb
12
brain
11
nerve
9
kidney
8
spleen
7
artery
7
embryo
4
musculature of body
2
vein
1
eye
Project
57
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
55
AMP-T2D consortium
2
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
12
2
body of pancreas
9
heart left ventricle
6
right atrium auricular region
3
coronary artery
2
+ See 5 more…
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cardiac fibroblast
2
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