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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
2
ChIP-seq
2
pCHi-C
2
total RNA-seq
1
ATAC-seq
Assay category
10
3D chromatin structure
2
DNA binding
2
Transcription
1
DNA accessibility
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
322
August, 2017
209
May, 2021
207
October, 2019
200
May, 2022
186
June, 2019
183
February, 2023
August, 2021
152
May, 2020
132
February, 2021
113
May, 2019
94
December, 2017
91
November, 2017
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
40
May, 2024
38
July, 2019
27
November, 2018
26
November, 2019
24
February, 2018
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
11
September, 2017
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
6
November, 2020
5
March, 2019
4
July, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
tsv
13
bigWig
12
bedpe bed3+
11
bam
10
hic
2
bed narrowPeak
2
ibed
Organism
17
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
cell line
1
primary cell
Organ
6
pancreas
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
epithelium
1
liver
1
vein
Project
13
AMP
4
T1D
Genome assembly (visualization)
15
hg19
2
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
cell line
files.file_type!
tsv
month_released!
August, 2021
organ_slims!
limb
BIOSAMPLE
ASSAY
17 results
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Clear Filters
Hi-C
ChIP-seq
pCHi-C
total RNA-seq
ATAC-seq
tissue
islet of Langerhans
2
2
1
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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