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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
45
ATAC-seq
23
ChIP-seq
Assay category
188
Transcription
45
DNA accessibility
23
DNA binding
Target of assay
23
control
Date released
468
February, 2021
256
May, 2020
170
May, 2021
164
July, 2018
160
August, 2017
75
July, 2019
49
April, 2018
47
October, 2019
31
October, 2018
26
September, 2018
23
February, 2018
23
May, 2019
22
December, 2017
19
November, 2019
15
April, 2019
15
August, 2021
15
November, 2017
9
March, 2020
9
November, 2018
8
June, 2019
6
May, 2022
September, 2017
5
December, 2019
4
December, 2018
4
November, 2020
3
August, 2018
3
June, 2018
3
October, 2017
1
January, 2019
1
March, 2019
Available data
283
bam
260
bigWig
188
tsv
50
tagAlign
bed narrowPeak
Organism
256
Homo sapiens
Biosample type
166
tissue
90
primary cell
Organ
166
liver
Project
211
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
211
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
biosample_type!
cell line
files.file_type!
bed narrowPeak
month_released!
September, 2017
BIOSAMPLE
ASSAY
256 results
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total RNA-seq
ATAC-seq
ChIP-seq
tissue
liver
143
23
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
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