Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
192
total RNA-seq
50
ChIP-seq
46
ATAC-seq
1
DNase-seq
Assay category
192
Transcription
50
DNA binding
47
DNA accessibility
Target of assay
27
histone
27
histone modification
27
narrow histone mark
23
control
Date released
477
February, 2021
283
May, 2020
August, 2017
272
May, 2021
221
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
82
July, 2019
79
April, 2019
78
November, 2017
76
October, 2018
72
September, 2018
49
April, 2018
44
November, 2019
41
August, 2021
39
February, 2018
26
November, 2018
24
May, 2022
15
October, 2017
11
March, 2020
11
September, 2017
7
December, 2018
7
January, 2019
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
289
bam
265
bigWig
192
tsv
50
tagAlign
29
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
289
Homo sapiens
Biosample type
193
tissue
96
primary cell
Organ
193
liver
6
connective tissue
Project
244
AMP
45
T1D
Genome assembly (visualization)
266
hg19
213
GRCh38
Lab
244
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
biosample_type!
cell line
month_released!
August, 2017
BIOSAMPLE
ASSAY
289 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
tissue
liver
143
50
primary cell
osteoblast
4
1
1
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
+ See 21 more…
See all biosamples
Download