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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
total RNA-seq
90
ChIP-seq
13
ATAC-seq
Assay category
169
Transcription
90
DNA binding
13
DNA accessibility
Target of assay
85
histone
85
histone modification
44
broad histone mark
41
narrow histone mark
4
transcription factor
1
control
Date released
477
February, 2021
283
May, 2020
274
August, 2017
272
May, 2021
221
October, 2019
June, 2019
164
July, 2018
115
May, 2019
90
December, 2017
82
July, 2019
75
April, 2019
75
November, 2017
72
September, 2018
65
October, 2018
49
April, 2018
44
November, 2019
41
August, 2021
39
February, 2018
26
November, 2018
24
May, 2022
15
October, 2017
11
March, 2020
11
September, 2017
7
December, 2018
7
January, 2019
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
298
bigWig
272
bam
169
tsv
132
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
272
Homo sapiens
Biosample type
149
primary cell
85
in vitro differentiated cells
38
tissue
cell line
Organ
39
pancreas
5
epithelium
3
heart
2
embryo
1
connective tissue
Project
137
AMP
135
T1D
Genome assembly (visualization)
271
GRCh38
271
hg19
Lab
137
AMP-T2D consortium
135
Kyle Gaulton, UCSD
Audit category:
68
inconsistent ontology term
biosample_type!
cell line
month_released!
June, 2019
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
272 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
51
84
13
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
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