Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
6
total RNA-seq
2
small RNA-seq
1
pCHi-C
1
snATAC-seq
Assay category
34
DNA accessibility
8
Transcription
Date released
33
June, 2019
4
July, 2019
3
March, 2020
2
February, 2020
1
May, 2022
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
43
Homo sapiens
Biosample type
40
tissue
3
primary cell
Organ
505
connective tissue
410
pancreas
407
adipose tissue
171
liver
146
heart
142
epithelium
96
kidney
61
brain
58
bone element
43
limb
43
musculature of body
29
vasculature
27
blood vessel
18
ureter
10
artery
9
embryo
9
eye
7
nerve
2
intestine
2
spleen
2
vein
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
40
hg19
39
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
43 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
total RNA-seq
small RNA-seq
pCHi-C
snATAC-seq
tissue
muscle of arm
17
muscle of leg
13
psoas muscle
2
1
skeletal muscle tissue
1
1
1
forelimb muscle
1
+ See 3 more…
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
See all biosamples
Download