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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1323
candidate regulatory elements
947
target gene predictions
737
accessible chromatin
392
histone modifications
173
binding sites
120
variant allelic effects
35
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1297
September, 2022
1093
February, 2021
333
November, 2021
229
May, 2021
134
June, 2020
133
May, 2020
125
February, 2024
65
January, 2020
56
January, 2021
51
August, 2021
41
November, 2022
40
March, 2020
31
February, 2023
31
October, 2022
29
August, 2017
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3762
bed bed3+
876
tsv
681
bed bed9
541
bigWig
108
txt
40
bigBed bed9
27
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3716
Homo sapiens
Biosample type
cell line
1817
tissue
1592
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
516
epithelium
302
connective tissue
278
kidney
267
musculature of body
243
brain
198
intestine
169
limb
166
lung
165
heart
153
vasculature
139
pancreas
118
blood vessel
110
extraembryonic component
109
skin of body
107
large intestine
93
stomach
89
eye
76
liver
69
embryo
64
small intestine
57
adrenal gland
54
placenta
51
ureter
46
adipose tissue
44
mammary gland
43
artery
43
penis
38
thymus
33
esophagus
31
gonad
27
bone element
26
spinal cord
spleen
19
prostate gland
17
ovary
17
thyroid gland
15
skeleton
15
vein
14
bronchus
14
nerve
14
uterus
13
lymphoid tissue
13
testis
12
lymphatic vessel
11
bone marrow
10
bodily fluid
mouth
9
blood
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Project
3349
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3755
hg19
623
GRCh38
biosample_type!
cell line
organ_slims!
mouth
spleen
BIOSAMPLE
TYPE
3762 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
1
2
stomach
40
21
3
1
kidney
29
14
10
2
1
1
1
brain
29
16
2
3
1
1
muscle of arm
33
16
1
1
+ See 215 more…
primary cell
monocyte
2
18
86
1
1
1
CD8-positive, alpha-beta T cell
7
5
4
30
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
1
2
2
2
1
+ See 328 more…
in vitro differentiated cells
neural progenitor cell
5
5
10
14
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
4
1
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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