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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
2486
bam
2252
bigWig
1362
tsv
1032
bed narrowPeak
730
fastq
604
bigBed narrowPeak
294
tagAlign
253
bed bed3+
244
bed broadPeak
209
bigBed broadPeak
94
txt
33
bed bedMethyl
33
bigBed bedMethyl
15
bedpe bed3+
12
hic
11
bed bed3
8
csv
4
bed bedgraph
2
hdf5
2
ibed
1
tagAlign bed3+
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
cell line
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
1
brain
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
biosample_type!
cell line
organ_slims!
vasculature
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
osteoblast
1
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