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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ChIP-seq
Assay category
100
DNA binding
Target of assay
78
histone modification
77
histone
38
broad histone mark
38
narrow histone mark
22
transcription factor
5
RNA binding protein
2
chromatin remodeller
Date released
132
May, 2021
115
October, 2019
100
August, 2017
92
August, 2021
65
February, 2023
40
May, 2024
38
May, 2022
32
September, 2018
27
May, 2020
25
November, 2019
22
December, 2017
16
February, 2018
9
February, 2021
6
October, 2017
5
July, 2019
2
March, 2020
1
April, 2019
1
November, 2017
1
November, 2020
0
November, 2018
Available data
314
fastq
308
bam
295
bigWig
159
bed narrowPeak
89
tsv
85
tagAlign
bigBed narrowPeak
50
bed broadPeak
42
bed bed3+
24
bigBed broadPeak
12
bed bedMethyl
12
bigBed bedMethyl
1
csv
Organism
100
Homo sapiens
Biosample type
44
tissue
42
in vitro differentiated cells
14
primary cell
Organ
43
connective tissue
32
pancreas
14
epithelium
13
musculature of body
12
liver
1
adipose tissue
Project
100
AMP
Genome assembly (visualization)
100
hg19
80
GRCh38
Lab
100
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
biosample_type!
cell line
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
100 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
18
skeletal muscle tissue
13
liver
12
subcutaneous abdominal adipose tissue
1
in vitro differentiated cells
adipocyte
42
primary cell
pancreatic alpha cell
7
pancreatic beta cell
7
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