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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
10
WGBS
Assay category
27
DNA methylation
Date released
15
July, 2019
6
August, 2017
6
November, 2018
Available data
2451
bam
2299
bigWig
1355
tsv
1065
bed narrowPeak
931
fastq
531
bigBed narrowPeak
329
tagAlign
234
bed bed3+
225
bed broadPeak
188
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
16
bedpe bed3+
15
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
Organism
27
Homo sapiens
Biosample type
18
tissue
9
primary cell
cell line
Organ
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
27
AMP
Genome assembly (visualization)
17
hg19
10
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
month_released!
October, 2019
organ_slims!
heart
BIOSAMPLE
ASSAY
27 results
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RRBS
WGBS
tissue
pancreas
1
2
adipose tissue
2
body of pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 7 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
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