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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
WGBS
15
RRBS
Assay category
31
DNA methylation
Date released
19
July, 2019
6
August, 2017
6
November, 2018
Available data
2681
bam
2528
bigWig
1462
tsv
1238
bed narrowPeak
931
fastq
584
bigBed narrowPeak
378
tagAlign
192
bed bed3+
185
bed broadPeak
153
zippedFastqFolder
148
bigBed broadPeak
98
txt
31
bed bedMethyl
31
bigBed bedMethyl
21
bedpe bed3+
20
hic
11
bed bed3
7
bed bedgraph
4
hdf5
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
31
Homo sapiens
Biosample type
24
tissue
7
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
31
AMP
Genome assembly (visualization)
16
GRCh38
15
hg19
Lab
31
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
organ_slims!
esophagus
kidney
organ_slims!!
kidney
BIOSAMPLE
ASSAY
31 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
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