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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
14
WGBS
Assay category
33
DNA methylation
Date released
23
July, 2019
6
August, 2017
4
November, 2018
Available data
2766
bam
2616
bigWig
1479
tsv
1386
bed narrowPeak
907
fastq
661
bigBed narrowPeak
378
tagAlign
267
bed bed3+
258
bed broadPeak
221
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
20
bedpe bed3+
19
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
33
Homo sapiens
Biosample type
23
tissue
10
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
19
hg19
14
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
organ_slims!
large intestine
spleen
vein
BIOSAMPLE
ASSAY
33 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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