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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
79
ChIP-seq
Assay category
187
DNA accessibility
79
DNA binding
Target of assay
79
histone
79
histone modification
46
broad histone mark
33
narrow histone mark
RNA binding protein
7
transcription factor
Date released
206
June, 2019
92
May, 2019
62
October, 2019
61
April, 2019
60
November, 2017
46
December, 2017
40
August, 2017
34
October, 2018
17
November, 2018
14
September, 2018
6
January, 2019
6
October, 2017
5
September, 2017
3
December, 2018
2
July, 2019
1
November, 2020
Available data
289
bam
269
bigWig
267
bed narrowPeak
266
bigBed narrowPeak
196
bed broadPeak
190
bigBed broadPeak
187
bed bed3+
66
tagAlign
6
fastq
Organism
266
Homo sapiens
Biosample type
220
tissue
cell line
46
primary cell
Organ
90
brain
79
kidney
41
musculature of body
32
heart
32
limb
18
epithelium
18
ureter
14
connective tissue
9
vasculature
6
blood vessel
5
eye
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
266
AMP
Genome assembly (visualization)
266
GRCh38
191
hg19
Lab
266
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
biosample_type!
cell line
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
266 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
layer of hippocampus
16
caudate nucleus
1
12
kidney
13
+ See 38 more…
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
2
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
+ See 17 more…
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