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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
9
DNase-seq
7
total RNA-seq
6
WGBS
2
ATAC-seq
1
FAIRE-seq
Assay category
23
DNA binding
12
DNA accessibility
7
Transcription
6
DNA methylation
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
7
transcription factor
3
other context
3
other post-translational modification
Date released
468
February, 2021
298
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
187
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
72
December, 2017
72
September, 2018
66
November, 2017
65
April, 2019
49
April, 2018
47
October, 2018
40
May, 2024
31
February, 2018
25
August, 2021
23
November, 2018
20
May, 2022
19
November, 2019
14
October, 2017
13
March, 2020
7
August, 2020
7
January, 2018
6
January, 2019
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
December, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
109
bed narrowPeak
106
tsv
67
bam
64
xls
57
txt
48
bigWig
27
fastq
24
tagAlign
17
bigBed narrowPeak
14
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
bedpe bed3+
1
csv
1
hic
Organism
48
Homo sapiens
Biosample type
cell line
23
tissue
22
in vitro differentiated cells
3
primary cell
Organ
10
liver
7
pancreas
6
spleen
3
connective tissue
3
epithelium
2
brain
1
adipose tissue
Project
48
AMP
Genome assembly (visualization)
45
GRCh38
41
hg19
Lab
46
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
biosample_type!
cell line
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
WGBS
ATAC-seq
FAIRE-seq
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 2 more…
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
primary cell
hepatocyte
3
See all biosamples
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