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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
total RNA-seq
6
WGBS
Assay category
97
Transcription
6
DNA methylation
Date released
51
May, 2021
45
May, 2020
6
February, 2021
1
August, 2021
Available data
296
bigWig
260
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
103
tsv
84
tagAlign
66
txt
64
xls
6
hic
4
bed bed3+
4
bedpe bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
Organism
103
Homo sapiens
Biosample type
102
primary cell
cell line
1
tissue
Organ
7
pancreas
6
epithelium
Project
96
T1D
6
HPAP
1
AMP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
AMP-T2D consortium
96
Kyle Gaulton, UCSD
6
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
biosample_type!
cell line
lab.title!
AMP-T2D consortium
month_released!
January, 2019
organ_slims!
lung
BIOSAMPLE
ASSAY
103 results
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total RNA-seq
WGBS
primary cell
monocyte
53
pancreatic alpha cell
6
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
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tissue
islet of Langerhans
1
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