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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
8
DNase-seq
6
WGBS
5
ATAC-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
16
DNA binding
14
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
9
control
7
transcription factor
3
other context
3
other post-translational modification
Date released
378
May, 2021
354
August, 2017
340
May, 2020
283
October, 2019
274
August, 2021
233
February, 2021
217
June, 2019
200
May, 2022
198
February, 2023
168
July, 2018
120
May, 2019
96
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
73
September, 2018
59
September, 2020
53
October, 2018
52
March, 2020
49
April, 2018
47
September, 2023
44
November, 2019
40
May, 2024
39
February, 2018
26
November, 2018
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2019
6
January, 2018
3
August, 2018
3
June, 2018
3
March, 2019
3
March, 2023
3
October, 2022
1
August, 2022
Available data
37
fastq
36
bam
27
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
10
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
csv
Organism
37
Homo sapiens
Biosample type
cell line
31
tissue
6
primary cell
Organ
18
pancreas
9
spleen
7
liver
5
epithelium
2
brain
adipose tissue
1
connective tissue
Project
37
AMP
Genome assembly (visualization)
28
GRCh38
23
hg19
Lab
37
AMP-T2D consortium
biosample_type!
cell line
lab.title!
Mark McCarthy, Oxford
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
37 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
2
islet of Langerhans
6
liver
4
2
body of pancreas
2
2
pancreas
2
1
+ See 2 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
pancreatic cell
1
See all biosamples
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