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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
gene expression
21
accessible chromatin
21
candidate regulatory elements
16
target gene predictions
13
chromatin state
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
33
September, 2022
29
February, 2024
18
February, 2021
9
August, 2021
9
March, 2020
5
November, 2021
4
March, 2023
3
January, 2020
3
June, 2020
3
May, 2020
2
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
78
bed bed3+
28
tsv
22
bigWig
11
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
130
Homo sapiens
Biosample type
65
primary cell
58
tissue
cell line
7
in vitro differentiated cells
Organ
916
epithelium
611
kidney
437
connective tissue
389
brain
358
musculature of body
258
vasculature
255
intestine
248
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
130
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
22
lymphatic vessel
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
125
AMP
5
ENCODE
Genome assembly (visualization)
99
hg19
54
GRCh38
1
hg18
biosample_type!
cell line
month_released!
August, 2020
organ_slims!
bodily fluid
BIOSAMPLE
TYPE
130 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
8
2
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
1
3
2
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
1
4
13
10
9
1
7
2
1
1
right lobe of liver
1
2
1
1
1
3
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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