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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
Assay category
48
DNA binding
Target of assay
109
histone
109
histone modification
61
broad histone mark
48
narrow histone mark
25
control
16
transcription factor
11
RNA binding protein
Date released
15
April, 2019
15
May, 2024
6
May, 2019
5
December, 2017
3
February, 2018
2
June, 2019
2
October, 2019
Available data
47
bed narrowPeak
47
bigWig
32
bam
22
bigBed narrowPeak
8
fastq
1
bed bed3+
Organism
48
Homo sapiens
Biosample type
38
tissue
8
in vitro differentiated cells
2
primary cell
Organ
117
brain
64
pancreas
49
liver
41
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
lymph node
1
pituitary gland
Project
48
AMP
Genome assembly (visualization)
46
GRCh38
32
hg19
Lab
33
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
biosample_type!
cell line
month_released!
August, 2021
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
tissue
left cardiac atrium
15
heart left ventricle
9
heart
4
heart right ventricle
4
coronary artery
2
+ See 2 more…
in vitro differentiated cells
pancreatic endoderm
6
Hepatic endoderm
2
primary cell
cardiac fibroblast
2
See all biosamples
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