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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ChIP-seq
Assay category
95
DNA binding
Target of assay
809
histone modification
808
histone
416
narrow histone mark
391
broad histone mark
control
95
transcription factor
40
RNA binding protein
3
chromatin remodeller
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
47
August, 2017
December, 2017
May, 2021
15
October, 2018
7
November, 2018
6
April, 2019
5
May, 2019
5
May, 2024
4
June, 2019
3
December, 2018
3
November, 2017
Available data
94
bigWig
90
bam
75
fastq
71
bed narrowPeak
44
bigBed narrowPeak
19
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
Organism
95
Homo sapiens
Biosample type
cell line
63
tissue
22
in vitro differentiated cells
10
primary cell
Organ
40
connective tissue
17
adipose tissue
17
pancreas
13
heart
8
liver
6
spleen
5
epithelium
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
95
AMP
Genome assembly (visualization)
93
GRCh38
89
hg19
Lab
90
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
3
inconsistent ontology term
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control read length
biosample_type!
cell line
month_released!
December, 2017
May, 2021
target.investigated_as!
control
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ChIP-seq
tissue
white adipose tissue
12
body of pancreas
9
liver
8
islet of Langerhans
7
spleen
6
+ See 10 more…
in vitro differentiated cells
adipocyte
22
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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