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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1380candidate regulatory elements
  • 952target gene predictions
  • 748chromatin state
  • 701accessible chromatin
  • 594gene expression
  • 393histone modifications
  • 172eQTL
  • 168binding sites
  • 157differential activity
  • 84Fine-mapped variants
  • 81variant allelic effects
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1969September, 2022
  • 1286February, 2021
  • 333November, 2021
  • 326May, 2021
  • 286September, 2023
  • February, 2024
  • 153May, 2020
  • 137June, 2020
  • 121March, 2020
  • 119August, 2021
  • 96January, 2022
  • 88January, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 44November, 2022
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 31February, 2023
  • 31October, 2022
  • 30August, 2017
  • 29March, 2024
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3824bed bed3+
  • 3487tsv
  • 690bed bed9
  • 504bigWig
  • 108txt
  • 40bigBed bed9
  • 27bed bed9+
  • 5bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 8058Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1961EpiMap
  • 749ENCODE
  • 542ChIP-Atlas
  • 482AMP
  • 474DGA
  • 393T2DKP
  • 370T1D
  • 281KPMP
  • 187BLUEPRINT
  • 150GTEx
  • 118 T2DKP
  • 101T2D
  • 91eQTLCatalogue
  • 81CMDGA
  • 55HPAP
  • 38STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5297tissue
  • 2365primary cell
  • cell line
  • 438in vitro differentiated cells
  • 4stem cell
Organ
  • 2885vasculature
  • 2827blood vessel
  • 2656vein
  • 2654bodily fluid
  • 2653blood
  • 839epithelium
  • 610kidney
  • 431connective tissue
  • 389brain
  • 348musculature of body
  • 251intestine
  • 243heart
  • 237limb
  • 218pancreas
  • 214lung
  • 143extraembryonic component
  • 139large intestine
  • 133skin of body
  • 117stomach
  • 106liver
  • 98eye
  • 94adipose tissue
  • 88embryo
  • 84small intestine
  • 75artery
  • 72adrenal gland
  • 70placenta
  • 64ureter
  • 50mammary gland
  • 49penis
  • 49thymus
  • 43esophagus
  • 43gonad
  • 40spinal cord
  • 36bone element
  • 34spleen
  • 25nerve
  • 24prostate gland
  • 23ovary
  • 22lymphatic vessel
  • 22thyroid gland
  • 19testis
  • 18lymphoid tissue
  • 18skeleton
  • 18uterus
  • 15bronchus
  • 15mouth
  • 13bone marrow
  • 13breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 7405AMP
  • 333ENCODE
  • 281KPMP
  • 59T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 4553hg19
  • 1496GRCh38
  • 3hg18
biosample_type!
  • cell line
month_released!
  • February, 2024
BIOSAMPLE
TYPE

8106 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
binding sites
differential activity
Fine-mapped variants
variant allelic effects
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37202153112
stomach4021193111
kidney2914161072111
brain291618213211
primary cell
monocyte218158641121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7514330
B cell1610862
endothelial cell37148122
in vitro differentiated cells
neural progenitor cell55410715
hematopoietic multipotent progenitor cell1910101111
adipocyte4663111
embryonic stem cell15611
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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