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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
27
ChIP-seq
4
DNase-seq
4
total RNA-seq
2
single cell RNA-seq
Assay category
41
DNA accessibility
27
DNA binding
6
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
4
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
61
bed narrowPeak
35
bam
28
bigWig
24
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
74
Homo sapiens
Biosample type
72
tissue
cell line
2
primary cell
Organ
846
pancreas
674
connective tissue
486
adipose tissue
438
epithelium
386
liver
332
kidney
316
heart
283
brain
165
vasculature
160
blood vessel
159
bone element
122
limb
96
musculature of body
74
artery
60
eye
43
nerve
29
embryo
22
vein
20
lung
18
spleen
18
ureter
16
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
74
AMP
Genome assembly (visualization)
63
GRCh38
28
hg19
Lab
74
AMP-T2D consortium
biosample_type!
cell line
month_released!
January, 2019
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
74 results
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ATAC-seq
ChIP-seq
DNase-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
36
4
2
1
tibial artery
1
23
2
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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