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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
839
pancreas
664
connective tissue
478
adipose tissue
431
epithelium
377
liver
324
kidney
295
heart
266
brain
159
bone element
154
vasculature
149
blood vessel
117
limb
81
musculature of body
72
artery
60
eye
43
nerve
29
embryo
24
spleen
21
vein
19
lung
18
ureter
skeleton
8
blood
8
bodily fluid
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
24
AMP-T2D consortium
biosample_type!
cell line
month_released!
July, 2019
March, 2020
organ_slims!
skeleton
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
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