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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 744accessible chromatin
  • 729candidate regulatory elements
  • 668gene expression
  • 392histone modifications
  • 303target gene predictions
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 99chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • September, 2022
  • 1286February, 2021
  • 333November, 2021
  • 326May, 2021
  • 286September, 2023
  • 210February, 2024
  • 153May, 2020
  • 137June, 2020
  • 121March, 2020
  • 119August, 2021
  • 96January, 2022
  • 88January, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 44November, 2022
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 31February, 2023
  • 31October, 2022
  • 30August, 2017
  • 29March, 2024
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3554tsv
  • 2634bed bed3+
  • 538bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 27bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 6299Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 750ENCODE
  • 584DGA
  • 542ChIP-Atlas
  • 518AMP
  • 405T2DKP
  • 396T1D
  • 281KPMP
  • 212BLUEPRINT
  • 155 T2DKP
  • 150GTEx
  • 98T2D
  • 91eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
  • 1EpiMap
Biosample type
  • 3946tissue
  • 2030primary cell
  • cell line
  • 365in vitro differentiated cells
  • 4stem cell
Organ
  • 2827vasculature
  • 2782blood vessel
  • 2654bodily fluid
  • 2653blood
  • 2650vein
  • 767epithelium
  • 407kidney
  • 338connective tissue
  • 243brain
  • 208pancreas
  • 168musculature of body
  • 140heart
  • 103intestine
  • 102limb
  • 102liver
  • 75eye
  • 74lung
  • 74skin of body
  • 72adipose tissue
  • 54artery
  • 54large intestine
  • 50stomach
  • 47extraembryonic component
  • 37embryo
  • 31adrenal gland
  • 31penis
  • 30mammary gland
  • 27small intestine
  • 25placenta
  • 25ureter
  • 24bone element
  • 24esophagus
  • 22gonad
  • 16lymphatic vessel
  • 16nerve
  • 16spinal cord
  • 16spleen
  • 16thymus
  • 15uterus
  • 13prostate gland
  • 11ovary
  • 11thyroid gland
  • 10bone marrow
  • 10bronchus
  • 10testis
  • 9skeleton
  • 7breast
  • 6lymphoid tissue
  • 6mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 3pituitary gland
  • 1nose
  • 1pericardium
Project
  • 5645AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 2723hg19
  • 888GRCh38
  • 3hg18
biosample_type!
  • cell line
month_released!
  • September, 2022
BIOSAMPLE
TYPE

6347 results

search-icontable-tab-icon
Clear Filters
pQTL
accessible chromatin
candidate regulatory elements
gene expression
histone modifications
target gene predictions
eQTL
binding sites
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans5111113213222
kidney1015721112
heart518311122
liver46223912211
primary cell
monocyte181586241121
CD8-positive, alpha-beta T cell4733051
endothelial cell1539171222
macrophage123239311
fibroblast1634216
in vitro differentiated cells
neural progenitor cell1017151
adipocyte4211414
embryonic stem cell61115
hematopoietic multipotent progenitor cell19111
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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