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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
total RNA-seq
12
ATAC-seq
3
ChIP-seq
Assay category
41
Transcription
12
DNA accessibility
3
DNA binding
Target of assay
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
80
May, 2022
61
September, 2018
51
February, 2023
33
April, 2018
33
July, 2018
33
October, 2019
29
August, 2017
20
June, 2019
19
December, 2017
19
September, 2020
13
July, 2019
7
August, 2020
6
December, 2019
6
February, 2021
6
November, 2017
5
May, 2019
5
May, 2021
5
September, 2017
4
August, 2021
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
1
March, 2020
Available data
37
fastq
14
bed narrowPeak
5
bam
4
bigWig
4
tsv
3
tagAlign
Organism
56
Homo sapiens
Biosample type
37
primary cell
cell line
14
tissue
5
in vitro differentiated cells
Organ
95
pancreas
56
epithelium
39
heart
35
artery
35
blood vessel
35
vasculature
31
eye
16
connective tissue
9
bone element
8
skeleton
2
embryo
1
adipose tissue
1
bone marrow
1
brain
1
thymus
Project
37
HPAP
19
AMP
Genome assembly (visualization)
16
hg19
4
GRCh38
Lab
37
Klaus Kaestner, Upenn
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
organ_slims!
esophagus
BIOSAMPLE
ASSAY
56 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
pigmented layer of retina
2
12
in vitro differentiated cells
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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