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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
19
total RNA-seq
2
Hi-C
Assay category
29
DNA accessibility
19
Transcription
2
3D chromatin structure
Date released
619
February, 2021
364
August, 2017
362
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
214
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
115
May, 2019
108
July, 2019
88
November, 2017
74
April, 2019
73
September, 2018
61
October, 2018
59
September, 2020
53
March, 2020
52
December, 2017
49
April, 2018
47
September, 2023
45
November, 2019
39
February, 2018
35
May, 2024
25
February, 2020
23
October, 2017
20
November, 2018
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
4
December, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
45
bam
25
bed narrowPeak
19
bigWig
19
tsv
2
hic
1
bed broadPeak
1
bedpe
1
bedpe bed3+
1
fastq
Organism
50
Homo sapiens
Biosample type
45
tissue
cell line
5
in vitro differentiated cells
Organ
44
pancreas
1
adipose tissue
1
connective tissue
Project
50
AMP
Genome assembly (visualization)
48
hg19
46
GRCh38
Lab
45
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
6
inconsistent ontology term
biosample_type!
cell line
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
23
19
2
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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