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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 178total RNA-seq
  • 164ChIP-seq
  • 18ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 178Transcription
  • 164DNA binding
  • 18DNA accessibility
  • 1DNA methylation
Target of assay
  • 139histone
  • 139histone modification
  • 76broad histone mark
  • 63narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 619February, 2021
  • 411August, 2017
  • 378May, 2021
  • 340May, 2020
  • 284October, 2019
  • 275August, 2021
  • 218June, 2019
  • 200May, 2022
  • 199February, 2023
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 91November, 2017
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 59September, 2020
  • 53March, 2020
  • 49April, 2018
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 39February, 2018
  • 27November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 10November, 2020
  • 7August, 2020
  • 7December, 2018
  • 7January, 2018
  • 7January, 2019
  • 5March, 2019
  • 4August, 2018
  • 3June, 2018
  • 3March, 2023
  • 3October, 2022
  • 1August, 2022
Available data
  • 298bigWig
  • 272bam
  • 169tsv
  • 132bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 378Homo sapiens
Biosample type
  • 206primary cell
  • 132in vitro differentiated cells
  • 40tissue
  • cell line
Organ
  • 40pancreas
  • 5epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 226AMP
  • 152T1D
Genome assembly (visualization)
  • 311hg19
  • 271GRCh38
Lab
  • 235Kyle Gaulton, UCSD
  • 143AMP-T2D consortium
Audit category:
  • 69inconsistent ontology term
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

378 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte52851311
CD8-positive, alpha-beta T cell2331
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
cardiomyocytes593
embryonic stem cell5375
induced pluripotent stem cell9
pancreatic PP cell3
cardiac fibroblast1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
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