Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 91ChIP-seq
Assay category
  • 91DNA binding
Target of assay
  • 73histone
  • 73histone modification
  • 42broad histone mark
  • 31narrow histone mark
  • 15control
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 619February, 2021
  • 411August, 2017
  • 378May, 2021
  • 340May, 2020
  • 284October, 2019
  • 275August, 2021
  • 218June, 2019
  • 200May, 2022
  • 199February, 2023
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 91November, 2017
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 59September, 2020
  • 53March, 2020
  • 49April, 2018
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 39February, 2018
  • 27November, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 10November, 2020
  • 7August, 2020
  • 7December, 2018
  • 7January, 2018
  • 7January, 2019
  • 5March, 2019
  • 4August, 2018
  • 3June, 2018
  • 3March, 2023
  • 3October, 2022
  • 1August, 2022
Available data
  • 78bam
  • 66bigWig
  • 66tagAlign
  • 64bed narrowPeak
  • 63bigBed narrowPeak
  • 12bed broadPeak
  • 9fastq
  • 6bigBed broadPeak
Organism
  • 91Homo sapiens
Biosample type
  • cell line
  • 82tissue
  • 9primary cell
Organ
  • 91brain
  • 6epithelium
  • 6vasculature
  • 3blood vessel
Project
  • 91AMP
Genome assembly (visualization)
  • 63GRCh38
  • 15hg19
Lab
  • 91AMP-T2D consortium
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

91 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
layer of hippocampus22
caudate nucleus15
substantia nigra15
cingulate gyrus14
middle frontal area 4614
primary cell
astrocyte of the cerebellum3
brain microvascular endothelial cell3
choroid plexus epithelial cell3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego