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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 37ATAC-seq
  • 28ChIP-seq
  • 4DNase-seq
  • 4total RNA-seq
  • 2single cell RNA-seq
Assay category
  • 41DNA accessibility
  • 28DNA binding
  • 6Transcription
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 7control
  • 6narrow histone mark
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 35February, 2023
  • 26October, 2019
  • 5May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
  • 2June, 2019
Available data
  • 62bed narrowPeak
  • 36bam
  • 29bigWig
  • 25bigBed narrowPeak
  • 6tsv
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 75Homo sapiens
Biosample type
  • 73tissue
  • cell line
  • 2primary cell
Organ
  • 854pancreas
  • 684connective tissue
  • 491adipose tissue
  • 445epithelium
  • 390liver
  • 335kidney
  • 327heart
  • 286brain
  • 170vasculature
  • 164blood vessel
  • 159bone element
  • 122limb
  • 96musculature of body
  • 75artery
  • 61eye
  • 43nerve
  • 29embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 8blood
  • 8bodily fluid
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 75AMP
Genome assembly (visualization)
  • 64GRCh38
  • 29hg19
Lab
  • 75AMP-T2D consortium
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

75 results

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ATAC-seq
ChIP-seq
DNase-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery36521
tibial artery12321
pulmonary artery2
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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